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水稻斑点叶基因SPL40的图位克隆及功能鉴定

摘要第6-7页
ABSTRACT第7-8页
LIST OF ABBREVIATIONS第13-16页
CHAPTER1 INTRODUCTION第16-38页
    1.1 GENERAL INTRODUCTION第16-18页
    1.2 REVIEW OF LITERATURE第18-38页
        1.2.1 Lesion mimic mutants第18-20页
        1.2.2 Hypersensitive response and programmed cell death第20-21页
        1.2.3 LMM and systemic acquired resistance(SAR)第21-22页
        1.2.4 Factors affecting development of lesion mimic phenotype第22-23页
        1.2.5 Enhanced defense responses and disease resistance in LMMs第23页
        1.2.6 Benefits of studying LMM第23-24页
        1.2.7 Rice as a model for studying LMM第24-25页
        1.2.8 Rice LMMs identified and studied so far第25-32页
        1.2.9 Bacterial blight disease of rice第32-33页
        1.2.10 LMM/spl mutants with resistance to bacterial blight of rice第33-35页
        1.2.11 Advanced gene mapping with high-throughput resequencing methods第35-36页
        1.2.12 Mediator:a master transcriptional regulator第36-38页
CHAPTER2 Agronomic and Phenotypic Characterization of spl40第38-53页
    2.1 INTRODUCTION第38-39页
    2.2 MATERIALS AND METHODS第39-44页
        2.2.1 Plant materials and growth conditions第39页
        2.2.2 Photosynthetic pigment content measurement第39-40页
        2.2.3 Total soluble protein content measurement第40-41页
        2.2.4 Measurement of photosynthesis related parameters第41页
        2.2.5 Preperation of RNA第41-42页
        2.2.6 Synthesis of cDNA第42-43页
        2.2.7 Quantitative-Real-time PCR(qRT-PCR)第43-44页
        2.2.8 Shading experiment第44页
        2.2.9 Statistical analysis第44页
    2.3 RESULTS第44-50页
        2.3.1 Phenotypic performance of spl第44-46页
        2.3.2 Reductions in photosynthetic pigment and soluble protein content第46-47页
        2.3.3 Altered photosynthetic capacity in spl第47-48页
        2.3.4 Downregulated expression of photosynthesis related genes in spl40第48-49页
        2.3.5 Lesion initiation was light-dependent第49-50页
    2.4 DISCUSSION第50-52页
    2.5 CONCLUSION第52-53页
CHAPTER3 Analysis of Cell Death Occurrence,ROS Production and Evaluation of Bacterial Blight Resistance in spl40第53-70页
    3.1 INTRODUCTION第53-54页
    3.2 MATERIALS AND METHODS第54-60页
        3.2.1 Histochemical analyses第54-55页
            3.2.1.1 Evans blue staining第54页
            3.2.1.2 DAB staining第54-55页
            3.2.1.3 NBT staining第55页
        3.2.2 Measurement of physio-biochemical parameters第55-59页
            3.2.2.1 Measurement of MDA content第55-56页
            3.2.2.2 Measurement of CAT activity第56-57页
            3.2.2.3 Measurement of SOD activity第57-58页
            3.2.2.4 Measurement of POD activity第58-59页
        3.2.3 Disease resistance evaluation第59-60页
        3.2.4 Analysis of gene expression by qRT-PCR第60页
        3.2.5 Statistical analysis第60页
    3.3 RESULTS第60-67页
        3.3.1 ROS accumulation and cell death occur in spl第60-63页
        3.3.2 Perturbed ROS scavenging system in spl第63-65页
        3.3.3 Enhanced resistance to bacterial blight pathogen第65-67页
    3.4 DISCUSSION第67-69页
    3.5 CONCLUSION第69-70页
CHAPTER4 Genetic Mapping,Map-based Cloning and Functional Complementation of spl40第70-105页
    4.1 INTRODUCTION第70-71页
    4.2 MATERIALS AND METHODS第71-91页
        4.2.1 Genetic control analysis第71页
        4.2.2 Gene mapping第71-73页
            4.2.2.1 Primary mapping and fine mapping第71-72页
            4.2.2.2 High-throughput sequencing to detect the candidate SNP第72页
            4.2.2.3 Confirmation of the candidate SNP第72-73页
        4.2.3 Cloning of candidate gene and vector construction for functional complementation第73-80页
            4.2.3.1 PCR amplification of genomic fragments of Os05G0312000第73-76页
            4.2.3.2 TA cloning and sequencing of genomic fragments第76-79页
            4.2.3.3 Cloning into pCAMBIA1300 vector第79-80页
        4.2.4 Vector construction for overexpression of spl第80-83页
            4.2.4.1 PCR amplification of full length coding sequence第80-81页
            4.2.4.2 Vector construction第81-83页
        4.2.5 Trangenic plant development via Agrobacterium tumefaciens-mediated plant transformation第83-84页
            4.2.5.1 Transformation of plamsid vector into Agrobacterium tumefaciens by electroporation method第83页
            4.2.5.2 Agrobacterium tumefaciens-mediated plant transformation and plant regeneration第83-84页
        4.2.6 Protoplast isolation and subcellular localization第84-88页
            4.2.6.1 Vector construction for subcellular localization第84-85页
            4.2.6.2 Rice protoplast isolation第85-88页
        4.2.7 Vector construction RNA interference(RNAi)第88-89页
        4.2.8 Analysis of SPL40 gene expression in different parts第89-90页
        4.2.9 Yeast two-hybrid assay to find the interacting protein第90-91页
    4.3 RESULTS第91-102页
        4.3.1 Genetic control of spl第91页
        4.3.2 Physical mapping of spl40 mutation第91-93页
        4.3.3 Gene annotation of Os05G0312000(LOC_Os05g24684)第93-94页
        4.3.4 Functional complementation with WT allele第94-96页
        4.3.5 spl40 allelic mutant spl40NIP第96-97页
        4.3.6 Phenotype of F1s from different crosses第97-98页
        4.3.7 Subcellular localization of SPL第98-99页
        4.3.8 Expression of SPL40 in different tissues第99-100页
        4.3.9 Identification of putative interacting proteins第100-102页
    4.4 DISCUSSION第102-104页
    4.5 CONCLUSION第104-105页
CHAPTER5 Major Findings and Future Perspectives第105-106页
    5.1 MAJOR FINDINGS第105页
    5.2 FUTURE PERSPECTIVES第105-106页
REFERENCES第106-115页
APPENDIX第115-131页
LIST OF PUBLICATIONS第131-132页
ACKNOWLEDGEMENTS第132-133页
AUTHORS RESUME第133页

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