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Comprehensive Sequence and Expression Profile Analysis of a Nitrogen Stress Induced Gene "PEX11" in Rice (Oryza Sativa L.)

Abstract第6-7页
Abbreviations第8-9页
1 Literature Review第9-23页
    1.1 Introduction第9-10页
    1.2 Nitrate assimilation第10-13页
    1.3 Ammonium assimilation第13-14页
    1.4 Genes involved in ammonium assimilation第14-16页
    1.5 Nitrogen assimilating enzymes第16-19页
    1.6 Information about gene families involved in N transporters and assimilation第19-21页
    1.7 Literature reviews about PEX 11 gene第21-23页
2 Objectives and Significance of the Proposed Research第23-25页
    2.1 Objectives第23页
    2.2 Significance第23-25页
3 Materials and Methods第25-30页
    3.1 Constructs and Transformation第25-26页
    3.2 Northern blot and Southern blot Analysis第26页
    3.3 Plant growth conditions第26页
    3.4 Identification of PEX11 homologs in rice第26-27页
    3.5 Protein sequence analysis of the PEX11 genes in different species第27页
    3.6 Phylogenetic analysis of the PEX11 family genes第27-28页
    3.7 Promoter sequence analysis of the OsPEX11 family genes第28页
    3.8 Ka/Ks analysis to determine the similarity between OsPEX11-2 and OsPEX11-3第28页
    3.9 Expression profile analysis of PEX11 family genes in rice第28-29页
    3.10 Differential expression of OsPEX11 gene family to different kinds of stresses第29-30页
4 Results第30-59页
    4.1 Selecting the candidate genes第30-32页
    4.2 Overexpression of the candidate genes第32-35页
    4.3 Silencing the candidate genes and promoter analysis第35-38页
    4.4 Special behavior of one of the candidate gene(LOC_Os07g05820)第38-39页
    4.5 Results of PEX11 gene family;Identification of PEX11 homologs in rice第39-43页
    4.6 Protein sequence analysis of the PEX11 family members第43-46页
    4.7 Phylogenctic analysis of PEX11 family members in all the related species第46-48页
    4.8 Promoter sequence analysis of PEX11 gene family members in rice and Arabidopsis第48-53页
    4.9 Divergence analysis第53-54页
    4.10 Expression profile analysis of PEX11 family in rice第54-56页
    4.11 Ka/Ks analysis for OsPEX11 gene family members第56-57页
    4.12 Differential responses of PEX11 gene family members to different kinds of stresses第57-59页
5 Discussions第59-67页
    5.1 Possible reasons for the failure of the first study第59-60页
    5.2 Evolution of PEX11 gene family第60-62页
    5.3 Expression profile analysis of PEX11 family genes in rice第62-63页
    5.4 Differential expression of PEX11 genes to different kinds of abiotic stresses第63-66页
    5.5 Brief perspective of future study第66-67页
References第67-76页
Protocol第76-89页
Resume第89-90页
Acknowledgement第90-91页

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