摘要 | 第6-7页 |
Abstract | 第7-8页 |
Abbreviation | 第9-12页 |
INTRODUCTION | 第12-15页 |
Chapter 1 LITERATURE REVIEW | 第15-50页 |
1.1 DEVELOPMENT OF SUPERIOR RICE VARIETIES | 第15-17页 |
1.2 GREEN SUPER RICE (GSR) PROJECT IN CHINA AND VIETNAM | 第17-21页 |
1.3 IDEAL PLANT TYPE IN RICE AND LEAF ROLLING | 第21-33页 |
1.3.1 Ideal plant type and superior rice | 第21-24页 |
1.3.2 Relationship of leaf rolling traits with yield | 第24-27页 |
1.3.3 Phenotypic relationships and data collection for rolling leaf | 第27-28页 |
1.3.4 QTL and gene ontology (GO) in leaf rolling | 第28-31页 |
1.3.5 Leaf rolling and morphological,chemical and environmental factors | 第31-33页 |
1.4 GENOTYPE X ENVIRONMENT INTERACTION AFFECTS RICE YIELD | 第33-34页 |
1.5 RELATIONSHIP BETWEEN STABLE QTL WITH ENVIRONMENT EFFECTS | 第34-50页 |
1.5.1 Mapping populations and QTL mapping | 第37-40页 |
1.5.2 Advanced backcross QTL strategy | 第40页 |
1.5.3 A genome-wide association study (GWAS) | 第40-43页 |
1.5.4 Linkage disequilibrium fine mapping | 第43-44页 |
1.5.5 Molecular marker system for genetic mapping | 第44-47页 |
1.5.6 Joint mapping and marker-trait association analysis | 第47-50页 |
Chapter 2 GSR LINES EVALUATION IN VIETNAM | 第50-58页 |
2.1 OBJECTIVES | 第50页 |
2.2 MATERIAL FOR RESEARCH | 第50-52页 |
2.3 TRIAL METHOD | 第52页 |
2.4 RESULT OF GREEN SUPER RICE BREEDING ADAPTATION TO CLIMATE CHANGE IN VIETNAM | 第52-58页 |
Chapter 3 RESULTS OF BASIC EXPERIMENT OF GSR LINES IN PHU YEN PROVINCE | 第58-69页 |
3.1 MATERIALS | 第59-60页 |
3.2 EXPERIMENTAL CONDITIONS AND RESEARCH CONTENT | 第60页 |
3.3 RESEARCH METHOD | 第60页 |
3.4 RESULT | 第60-68页 |
3.5 CONCLUSION | 第68-69页 |
Chapter 4 RESULTS OF TRIALS OF TWO GSR LINES IN PHU YEN PROVINCE | 第69-82页 |
4.1 MATERIALS | 第69-70页 |
4.2 EXPERIMENTAL CONDITIONS AND RESEARCH CONTENT | 第70页 |
4.3 RESEARCH METHOD | 第70-72页 |
4.4 RESULTS | 第72-81页 |
4.5 CONCLUSION: | 第81-82页 |
Chapter 5 JOINT MAPPING AND ALLELE MINING OF THE LEAF ROLLING TRAIT | 第82-96页 |
5.1 MATERIALS AND METHODS | 第82-85页 |
5.1.1 Field experiments and phenotyping method | 第82-83页 |
5.1.2 Genotyping and mapping | 第83-84页 |
5.1.3 Data analysis | 第84-85页 |
5.2 RESULTS | 第85-93页 |
5.2.1 Linkage mapping of main-effect QTLs controlling the leaf rolling trait | 第85-89页 |
5.2.2 GWAS mapping of QTLs affecting the leaf rolling trait | 第89页 |
5.2.3 Allele mining for the leaf rolling trait | 第89-90页 |
5.2.4 Subregional analysis of g Rl4-2 | 第90-93页 |
5.3 DISCUSSION | 第93-96页 |
5.3.1 QTLs underlying segregation of the leaf rolling trait in the RIL population | 第93-94页 |
5.3.2 Comparison of leaf rolling QTLs detected by GWAS with those revealed in earlier studies | 第94-96页 |
Summary | 第96-98页 |
Implications for rice breeding for ideal plant type | 第96页 |
Implication for GSR breeding adaptation to climate change in Vietnam | 第96-98页 |
REFERENCE | 第98-117页 |
APPENDIX | 第117-122页 |
APPENDIX 1. THIRTY-NINE QTLS ASSOCIATED WIH LEAF ROLLING TRAITS IN GRAMME DATABASE | 第117-119页 |
APPENDIX 2: TEN QTLS ASSOCIATED WIH LEAF TRAITS IN MINGHUI 63 AND OTHER PARENTS | 第119-120页 |
APPENDIX 3. REPRESENTATIVE SNPS FOR FAVORABLE ALLELES AND THEIR EFFECTS ON LEAF ROLLING INDEX (LRI, %) SIMULTANEOUSLY DETECTED BY GWAS AND LINKAGE MAPPING IN THIS STUDY OR PREVIOUS STUDIES | 第120-122页 |
ACKNOWLEDGEMENT | 第122-123页 |
AUTHOR | 第123-124页 |