首页--农业科学论文--畜牧、动物医学、狩猎、蚕、蜂论文--家畜论文--牛论文

Comparative RNA-Seq Transcriptome Analysis in the Epididymides of Yak and Cattleyak

ABSTRACT第5-6页
摘要第7-8页
Abbreviations第8-13页
1 Introduction第13-16页
2 Review of the literature第16-47页
    2.1第16-20页
        2.1.1 Developmental stages of the epididymis第16页
        2.1.2 Embryonic stage of epididymal development第16页
        2.1.3 The efferent ducts第16-17页
        2.1.4 Segment formation第17-18页
        2.1.5 The expression of androgen receptor (Ar)第18-20页
        2.1.6 Postnatal development第20页
    2.2 Epithelium structure of the epididymis第20-25页
        2.2.1 Principal cells第22页
        2.2.2 Epididymal narrow and clear cells第22-23页
        2.2.3 Epididymal apical cells第23页
        2.2.4 Epididymal basal cells第23-24页
        2.2.5 Epididymal halo cells第24-25页
        2.2.6 Epididymal smooth muscle cells第25页
    2.3 Epididymal maturation of sperm in the luminal fluid第25-37页
        2.3.1 Ions第26-30页
        2.3.2 Lipids第30-33页
        2.3.3 Proteins第33-37页
    2.4 Steroids and Lumicrine factors regulation of epididymal function第37-39页
        2.4.1 Steroids第37-38页
        2.4.2 Lumicrine factors第38-39页
    2.5 Epididymal gene expression Regulation第39-44页
        2.5.1 Beta-defensins第39-40页
        2.5.2 Lipocalins第40-42页
        2.5.3 Aquaporins第42-44页
    2.6 Research technical route第44-45页
        2.6.1 Experimental process第44-45页
        2.6.2 Bioinformatics analysis第45页
    2.7 Objectives of this study第45-47页
3 Materials and methods第47-57页
    3.1 Epididymal sample collection and Animals第48-49页
    3.2 RNA extraction, library preparation, and sequencing第49-50页
    3.3 Data Processing, and assembly of yak and cattleyaktranscriptome第50-52页
    3.4 Functional annotation and functional enrichment analysis DEGs第52页
    3.5 Gene Ontology (GO) enrichment analysis of DEGs第52-53页
    3.6 KEGG pathway enrichment analysis of DEGs第53-54页
    3.7 qRT-PCR Validation of m RNA-Seq data第54-57页
4 Results第57-76页
    4.1 Sequencing and assembly of yak and cattleyak transcriptome第57-58页
    4.2 Comparative analysis of gene expression第58-59页
    4.3 (GO) enrichment analysis of DEGs第59-61页
    4.4 KEGG Pathway enrichment analysis of DEGs第61-73页
    4.5 qRT-PCR Validation of Illumina RNA-Seq data第73-76页
5 Discussion and conclusion第76-85页
    5.1 Discussion第76-79页
        5.1.1 Use of m RNA-Seq in male cattleyak infertility Research第76-79页
    5.2 KEGG functional enrichment analysis of the DEGs第79-83页
    5.3 Conclusion第83-85页
6 Acknowledgments第85-87页
7 Reference第87-102页
8 Appendix A第102-118页
    8.1 Table 8-1 S1 List of top enriched GO terms for biological function第102-108页
    8.2 Table 8-2 S2 List of 271 KEGG enriched pathway of DEGs inYK and CY第108-118页

论文共118页,点击 下载论文
上一篇:猪繁殖与呼吸综合征病毒GP2蛋白B细胞表位和T细胞表位筛选
下一篇:摄食时间对瓦氏黄颡鱼蛋白质和脂质代谢相关基因表达的影响