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Exploring the Genetic Basis of Northern Leaf Blight via Genome Wide Association Mapping in Maize

CONTENTS第5-8页
Ⅰ. LIST OF TABLES第8-9页
Ⅱ. LIST OF FIGURES第9-11页
Ⅲ. ABBREVIATIONS第11-14页
Ⅳ. ABSTRACT第14-15页
1. INTRODUCTION第16-31页
    1.1. Food Security第16-17页
    1.2. Importance of Maize第17-19页
    1.3. Requirement for Optimum Growth第19-20页
    1.4. Level of Genetic Diversity in Maize第20-23页
    1.5. Availability of Molecular Marker第23-24页
    1.6. Global Losses due to Plant Diseases第24-30页
    1.7. Goals and Objectives of this Study第30-31页
2. BACKGROUND第31-57页
    2.1 The Phenomenon of Resistance in the Light of History第31-36页
    2.2 Concept of Pathology and General Terminology Used for Disease Resistance第36-38页
        2.2.1 Basic Concepts of Pathology第36页
        2.2.2 Pathogenesis第36-37页
        2.2.3 Epiphytotics第37-38页
    2.3 Resistance and Genetic Tools to Improve Resistance第38-45页
        2.3.1 Types of Resistance第38-39页
        2.3.2 Non-Host and Host Resistances第39-41页
        2.3.3 Quantitative Disease Resistance(QDR)and Multiple Disease Resistance (MDR)第41-45页
    2.4 Need for Genetic Diversity第45-47页
    2.5 Impact of Joint Linkage and Genome-Wide Association Mapping in Elevating Disease Resistance第47-48页
    2.6 Molecular Breeding for Disease-Resistant Maize:Process and Challenge第48-50页
    2.7 Meta-analysis for Foliar Diseases第50-53页
    2.8 Genome Wide Association Mapping for Northern Leaf Blight第53-54页
    2.9 Linkage Mapping for Southern Leaf Blight第54-57页
3. MATERIAL AND METHODS第57-66页
    3.1 Collecting and Reporting QTL Data for NLB,SLB and GLS第57-58页
    3.2 QTL Projection and Meta-Analysis for NLB,SLB and GLS QTL第58页
    3.3 NBS-LRR Gene Family Prediction第58-59页
    3.4 GWAS for Norhtern Leaf Blight第59-63页
        3.4.1 Germplasm and Phenotyping第59-60页
        3.4.2 Statistical Analyses第60-61页
        3.4.3 Genotyping of Inbred Lines第61页
        3.4.4 SNP Based Genome wide Association Mapping第61-62页
        3.4.5 Haplotype based Association Studies第62页
        3.4.6 Anderson Darling Test第62-63页
    3.5 Southern Leaf Blight第63-66页
        3.5.1 Plant Materials and Field Design第63页
        3.5.2 Genotyping of the RIL第63-64页
        3.5.3 Inoculation and Disease Assessment第64页
        3.5.4 Linkage Map Construction and QTL Analysis第64-65页
        3.5.5 Data Analysis第65-66页
4. RESULTS第66-91页
    4.1 Disease QTL Collection第66-68页
    4.2 Distribution of QTL on Different Chromosome第68-69页
    4.3 Clustering and Multiple Disease Resistance QTL第69-71页
    4.4 Meta-Analysis and Real QTL第71-75页
    4.5 Northern Leaf Blight第75-87页
        4.5.1 Phenotypic Diversity for NLB第75-76页
        4.5.2 The Familial Relatedness Among the Lines第76-79页
        4.5.3 Genetic Basis Revealed by GWAS第79-84页
        4.5.4 Haplotype-based Association Studies第84-86页
        4.5.5 Anderson-Darling Test for Genome Scanning第86-87页
    4.6 Southern Leaf Blight第87-91页
        4.6.1 Phenotypic Analysis for SLB第87-89页
        4.6.2 Genetic linkage map and QTL analysis第89-91页
5. DISCUSSION第91-102页
    5.1 Evidence of Multiple Disease Resistance第91-93页
    5.2 Molecular Breeding for Disease Resistance and the Role of Meta-Analysis第93-94页
    5.3 Implication of Meta-Analysis in Marker Assisted Selection(MAS)第94-95页
    5.4 The NBS-LRR Genes in Disease Resistance第95-96页
    5.5 Genetic Basis of Northern Leaf Blight第96-99页
        5.5.1 Evidence of Marker Loci via A-D Test第99页
    5.6 Genetic Basis of Southern Leaf Blight第99-102页
6. CONCLUSION第102-106页
    6.1 Conclusion and Perspective第102-106页
7. RENCES第106-127页
8. APPENDICES第127-144页
DEDICATION第144-146页
ACKNOWLEDGEMENT第146-148页
CURRICULUM VITEA第148-151页

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