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Construction and Characterization of Cara Cara Navel Orange (Citrus Sinensis Osbeck) Bacterial Artificial Chromosome Library and Identification of Clones Containing Phytoene Synthase Gene

Abstract第7-8页
List of abbreviations第9-11页
1 Introduction第11-17页
2 Review of Literature第17-38页
    2.1 Importance and global production of citrus第17-18页
    2.2 Nutritional Importance of Citrus第18-20页
    2.3 Genomics and its role in plant improvement第20-21页
    2.4 Bacterial Artificial Chromosome Library第21-22页
    2.5 Development of BAC vector(pCUGIBAC1)第22-24页
    2.6 BAC library applications in the development of plant genomics第24-33页
        2.6.1 Use of BAC clones for molecular marker development第25-28页
        2.6.2 Map-based/Positional cloning第28-29页
        2.6.3 Physical Mapping第29-32页
        2.6.4 BAC library applications in citrus genomics第32-33页
    2.7 Flourescence In situ hybridization(FISH)第33-35页
        2.7.1 BAC-FISH applications in plant genetics第34-35页
    2.8 Genomic in situ hybridization(GISH)第35-38页
3 Materials and Methods第38-46页
    3.1 Plant material第38页
    3.2 BAC vector preparation第38-39页
    3.3 Preparation of high-molecular-weight(HMW) DNA第39-40页
    3.4 Determination of Optimal Partial Digestion Conditions第40页
    3.5 Ligation and Transformation第40-41页
    3.6 Preparation of BAC DNA and estimation of insert size第41-42页
    3.7 Screening by Southern hybridization第42-43页
    3.8 PCR-based screening第43-44页
    3.9 Slide preparation第44页
    3.10 DNA extraction,probe labelling and GISH(Genomic In Situ Hybridization) analyses第44-46页
4 Results第46-65页
    4.1 Preparation of BAC vector第46-49页
        4.1.1 λ DNA transformation for efficiency check第48-49页
    4.2 Preparation of High Molecular Weight(HMW) inserts DNA第49-53页
        4.2.1 Partial digestion of HMW genomic DNA第50-52页
        4.2.2 First size and second size selection第52-53页
    4.3 Construction and insert sizing of citrus BAC library第53-55页
        4.3.1 Statistics of the library第54-55页
    4.4 Characterization of the C.sinensis BAC library第55-59页
        4.4.1 Isolation of BAC clones containing phytoene synthase(Psy) gene第58页
        4.4.2 PCR Based screening第58-59页
    4.5 Insert size analysis of positive clones第59-60页
    4.6 DAPI staining of C.sinensis chromosomes第60-62页
    4.7 Genomic In situ Hybridization analysis(GISH)第62-65页
5 Discussions第65-76页
    5.1 BAC library and its application in citrus第65-67页
    5.2 Quality Assessments of the BAC library of C.sinensis第67-69页
    5.3 Important steps in the construction of the library第69-72页
    5.4 DAPI and GISH analysis in citrus第72-74页
    5.5 Conclusion and Future prospects第74-76页
REFERENCES第76-107页
Protocols第107-128页
Acknowledgement第128-131页
CURRICULUM VITAE第131-132页
ACDEMIC EXPERIENCE第132-137页

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