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小麦内生菌及其功能研究

摘要第6-7页
Abstract第7-9页
CHAPTER Ⅰ INTRODUCTION第17-30页
    1.1 BACKGROUND第17页
    1.2 ENDOPHYTES第17页
    1.3 ENTRY OF ENDOPHYTES IN TO THE HOST PLANTS第17-18页
    1.4 BENEFICIAL FUNCTIONS OF ENDOPHYTES FOR PLANTS第18-21页
        1.4.1 ENHANCE PHYTOSTIMULATION第18-19页
        1.4.2 NITROGEN FIXATION第19-20页
        1.4.3 PHOSPHATE SOLUBILIZATION ABILITY OF ENDOPHYTES第20-21页
        1.4.4 IRON HOMEOSTASIS第21页
        1.4.5 ROLE IN INDUCED SYSTEMIC TOLERANCE第21页
    1.5 GENES RELATED TO NITROGEN FIXATION第21-22页
    1.6 MIRACULOUS DIAZOTROPHIC BACTERIA第22-25页
        1.6.1 BIOLOGICAL NITROGEN FIXATION OF DIAZOTROPHS第22页
        1.6.2 SYMBIOTIC NITROGEN FIXERS PIONEERS FOR BNF第22-23页
            1.6.2.1 IMPORTANCE OF SYMBIOTIC NITROGEN FIXATION IN LEGUMES第22页
            1.6.2.2 ROLE OF SYMBIOTIC NITROGEN FIXATION IN NON-LEGUMES第22-23页
        1.6.3 EFFECT OF ASSOCIATIVE DIAZOTROPHIC NITROGEN FIXERS第23页
        1.6.4 ENDOPHYTIC DIAZOTROPHIC NITROGEN FIXERS第23页
        1.6.5 FREE LIVING NITROGEN FIXERS第23-25页
    1.7 NATURAL PRODUCTS FROM ENDOPHYTES第25-26页
        1.7.1 ANTIBIOTICS第25页
        1.7.2 ANTIVIRAL COMPOUNDS第25-26页
        1.7.3 ANTICANCER COMPOUNDS第26页
        1.7.4 ANTIOXIDANT PROPERTY第26页
        1.7.5 ANTIDIABETIC ACTIVITY第26页
        1.7.6 IMMUNOSUPPRESIVE COMPOUNDS FROM ENDOPHYTES第26页
    1.8 MICROBIAL DIVERSITY RESEARCH METHODS AND PROGRESS第26-27页
    1.9 JUSTIFICATION OF THE STUDY第27-28页
    1.10 RESEARCH PLAN第28页
    1.11 SCIENTIFIC QUESTIONS第28-29页
    1.12 HYPOTHESIS第29页
    1.13 OBJECTIVES第29-30页
CHAPTER Ⅱ MATERIALS AND METHODS第30-48页
    2.1 PLANT SAMPLING AND ISOLATION OF ENDOPHYTES第30-31页
    2.2 MOLECULAR IDENTIFICATION OF THE ISOLATED ENDOPHYTES第31-34页
    2.3 ANALYSIS OF THE DIVERSITY OF WHEAT ENDOPHYTIC NITROGEN FIXING BACTERIA第34-35页
        2.3.1 ENDOPHYTIC BACTERIA16S r DNA V5-V7 REGION AMPLIFICATION第34-35页
    2.4 ANALYSIS OF THE DIVERSITY OF nif HCONTAINING DIAZOTROPHS第35-36页
    2.5 DATA PROCESSING METHODS第36页
    2.6 GROWTH PROMOTING AND STRESS TOLERANCE PROPERTIES OF WHEAT ENDOPHYTES第36-42页
        2.6.1 EVALUATION OF SOME IMPORTANT PGP PROPERTIES第36-40页
            2.6.1.1 QUALITATIVE AND QUANTITATIVE ESTIMATION OF ACC DEMINASEACTIVITY第36-37页
            2.6.1.2 QUALITATIVE AND QUANTITATIVE SCREENING OF NITROGEN FIXING PROPERTY OF THE ISOLATED ENDOPHYTIC BACTERIA第37-38页
            2.6.1.3 QUANTIFICATION OF IAA第38页
            2.6.1.4 SIDEROPHORE PRODUCTION第38页
            2.6.1.5 QUALITATIVE SCREENING OF PHOSPHATE SOLUBILIZATION POTENCY·第38-39页
            2.6.1.6 AMMONIA(NH3)PRODUCTION第39页
            2.6.1.7 CYANOGENESIS-HYDROGEN CYANIDE(HCN)PRODUCTION第39页
            2.6.1.8 UREASE TEST第39页
            2.6.1.9 CATALASE TEST第39-40页
        2.6.2 ABIOTIC STRESS TOLERANCE PROPERTIES第40-41页
            2.6.2.1 SALT TOLERANCE TEST第40页
            2.6.2.2 HEAVY METAL RESISTANCE TEST第40页
            2.6.2.3 DROUGHT TOLERANCE TEST第40页
            2.6.2.4 TEMPERATURE TOLERANCE TEST第40-41页
            2.6.2.5 ANTIBIOTIC SENSITIVITY TEST第41页
        2.6.3 EFFECT OF ENDOPHYTIC INOCULATION ON WHEAT AND MAIZE GROWTH第41-42页
    2.7 ANTIDIABETIC AND ANTIMICROBIAL POTENTIALS OF WHEAT ENDOPHYTES·第42-45页
        2.7.1 SECONDARY METABOLITE EXTRACTION第42页
        2.7.2 PHYTOCHEMICAL ANALYSIS第42-43页
            2.7.2.1 TEST FOR PHENOLS第42页
            2.7.2.2 TEST FOR TERPENOIDS第42页
            2.7.2.3 TEST FOR FLAVONOIDS第42-43页
            2.7.2.4 TEST FOR SAPONINS第43页
            2.7.2.5 TEST FOR TANNINS第43页
            2.7.2.6 TEST FOR ALKALOIDS第43页
            2.7.2.7 TEST FOR CARBOHYDRATES第43页
            2.7.2.8 TEST FOR STEROIDS第43页
        2.7.3 ANTIDIABETIC SCREENING OF THE ENDOPHYTIC METABOLITES第43-44页
            2.7.3.1 α-AMYLASE INHIBITION ASSAY第43-44页
            2.7.3.2 α-GLUCOSIDASE INHIBITION ASSAY第44页
        2.7.4 ANTIMICROBIAL TEST OF CRUDE METABOLITES OF ENDOPHYTES第44-45页
            2.7.4.1 TEST STRAINS AND CULTURE MEDIA第44-45页
            2.7.4.2 ANTIFUNGAL ASSAY第45页
            2.7.4.3 ANTIBACTERIAL ASSAY第45页
    2.8 CHARACTERIZATION OF THE ISOLATED NOVEL ENDOPHYTIC BACTERIAUM7197~T(Paenibacillus rhizophilus)第45-47页
        2.8.1 GENOME SEQUENCING第45-46页
        2.8.2 16S rRNA GENE SEQUENCING AND ANALYSIS第46页
        2.8.3 MORPHOLOGICAL CHARACTERISTICS第46页
        2.8.4 PHENOTYPICAL AND BIOCHEMICAL CHARACTERISTICS第46页
        2.8.5 NITROGENASE ACTIVITY OF7197T第46-47页
        2.8.6 CYTOCHEMICAL COMPONENTS第47页
        2.8.7 Growth Promoting and Abiotic Stress Tolerance Properties of 7197~T第47页
        2.8.8 INOCULATION EFFECT OF7197~T ON WHEAT AND MAIZE GROWTH第47页
    2.9 STATISTICAL ANALYSIS第47-48页
CHAPTER Ⅲ ANALYSIS OF THE DIVERSITY OF WHEAT ENDOPHYTIC NITROGEN FIXING BACTERIA第48-86页
    3.1 INTRODUCTION第48页
    3.2 RESULTS AND ANALYSIS第48-77页
        3.2.1 DIVESRSITY OF WHEAT ENDOPHYTIC NITROGEN FIXING BACTERIA WITH CULTURE DEPENDENT METHOD第48-55页
        3.2.2 ANALYSIS OF DIVERSITY OF WHEAT ENDOPHYTIC NITROGEN FIXING BACTERIA BY CULTURE INDEPENDENT METHOD第55-77页
            3.2.2.1 DATA QUALITY CONTROL AND OTU BASIS ANALYSIS第55-57页
            3.2.2.2 GENUS ABUNDANCE HEAT-MAP第57-58页
            3.2.2.3 ANALYSIS OFΑLPHA(α)DIVERSITY OF N-FIXING ENDOPHYTIC BACTERIA IN WHEAT第58-64页
            3.2.2.4 ANALYSIS OF BETA(β)DIVERSITY OF N-FIXING ENDOPHYTIC BACTERIA IN WHEAT第64-66页
            3.2.2.5 ANALYSIS OF N-FIXING ENDOPHYTIC BACTERIA CORE FLORA第66-68页
            3.2.2.6 ANALYSIS OF N FIXING ENDOPHYTIC BACTERIA ON TAXONOMIC LEVELS·第68-77页
    3.3 Comparison of Biodiversity of Endophytic Bacteria with Culture Dependent and Culture Independent Methods第77-83页
    3.4 SUMMARY OF THE CHAPTER第83-86页
CHAPTER Ⅳ DIVERSITY OF nif H CONTAINING WHEAT DIAZOTROPHS第86-113页
    4.1 INTRODUCTION第86页
    4.2 RESULTS AND ANALYSIS第86-108页
        4.2.1 DIVERSITY OF nif H CONTAINING DIAZOTROPHS WITH CULTURE DEPENDENT METHOD第86-93页
        4.2.2 ANALYSIS OF DIVERSITY OF WHEAT ENDOPHYTIC NITROGENFIXINGDIAZOTROPHSIN WHEAT BY CULTURE INDEPENDENT METHOD第93-108页
            4.2.2.1 DATA QUALITY CONTROL AND OTU BASIS ANALYSIS第93-95页
            4.2.2.2 GENUS ABUNDANCE HEAT-MAP第95-97页
            4.2.2.3 ANALYSIS OFΑLPHA(α)DIVERSITY OF NITROGEN FIXING DIAZOTROPHS IN WHEAT第97-100页
            4.2.2.4 ANALYSIS OF BETA(β)DIVERSITY OF NITROGEN FIXING DIAZOTROPHS IN WHEAT第100-102页
            4.2.2.5 ANALYSIS OF CORE FLORA OF ENDOPHYTIC NITROGEN FIXING DIAZOTROPHS第102-103页
            4.2.2.6 ANALYSIS OF ENDOPHYTIC DIAZOTROPHS ON TAXONOMIC LEVELS第103-108页
    4.3 COMPARISON OF DIAZOTROPHBIODIVERSITYWITH CULTURE DEPENDENTAND CULTURE INDEPENDENT METHODS第108-111页
    4.4 SUMMARY OF THE CHAPTER第111-113页
CHAPTER Ⅴ GROWTH PROMOTING AND STRESS TOLERANCE PROPERTIES OF WHEAT ENDOPHYTES第113-133页
    5.1 INTRODUCTION第113页
    5.2 RESULTS第113-128页
        5.2.1 PGP TRAITS OF THE ISOLATED ENDOPHYTIC MICROBES第113-119页
            5.2.1.1 QUALITATIVE AND QUANTITATIVE SCREENING FOR NITROGENFIXATION ABILITY OF THE ISOLATED ENDOPHYTES第113-115页
            5.2.1.2 QUALITATIVE AND QUANTITATIVE ESTIMATION OF ACC DEAMINASE ACTIVITY第115页
            5.2.1.3 IAA PRODUCTION第115页
            5.2.1.4 SIDEROPHORE PRODUCTION第115-116页
            5.2.1.5 PHOSPHATE SOLUBILIZATION POTENCY第116页
            5.2.1.6 AMMONIA PRODUCTION第116-117页
            5.2.1.7 CYANOGENESIS第117页
            5.2.1.8 UREASE TEST第117-118页
            5.2.1.9 CATALASE TEST第118-119页
        5.2.2 ABIOTIC STRESS TOLERANCE第119-128页
            5.2.2.1 SALT TOLERANCE TEST第119-121页
            5.2.2.2 HEAVY METAL RESISTANCE TEST第121-123页
            5.2.2.3 DROUGHT RESISTANCE TEST第123-125页
            5.2.2.4 TEMPERATURE TOLERANCE TEST第125-126页
            5.2.2.5 ANTIBIOTIC SENSITIVITY TEST第126-128页
    5.3 INOCULATION EFFECT OF ENDOPHYTES ON WHEAT AND MAIZE第128-131页
    5.4 SUMMARY OF THE CHAPTER第131-133页
CHAPTER Ⅵ ANTIDIABETIC AND ANTIMICROBIAL POTENTIALS OF WHEATENDOPHYTES第133-142页
    6.1 INTRODUCTION第133页
    6.2 RESULTS第133-141页
        6.2.1 PHYTOCHEMICAL ANALYSIS第133-136页
        6.2.2 ANTIDIABETIC ACTIVITY OF THE MICROBIAL EXTRACTS第136-138页
        6.2.3 ANTIMICROBIAL ACTIVITY OF THE MICROBIAL EXTRACTS第138-141页
    6.3 SUMMARY OF THE CHAPTER第141-142页
CHAPTER Ⅶ CHARACTERIZATION OF THE ISOLATED NOVEL ENDOPHYTIC BACTERIUM7197T(Paenibacillus rhizophilus)第142-156页
    7.1 INTRODUCTION第142页
    7.2 RESULTS AND ANALYSIS第142-153页
        7.2.1 PHYLOGENETIC ANALYSIS OF16S r RNA GENE SEQUENCES第142-144页
        7.2.2 DETERMINATION OF DNA G+C MOL%AND DNA HOMOLOGY第144-145页
        7.2.3 MORPHOLOGICAL CHARACTERISTICS第145-146页
        7.2.4 PHENOTYPICAL AND BIOCHEMICAL CHARACTERISTICS第146-149页
        7.2.5 NITROGENASE ACTIVITY OF7197T第149-150页
        7.2.6 CYTOCHEMICAL COMPONENTS第150-153页
            7.2.6.1ANALYSIS OF FATTY ACID COMPONENTS第150-151页
            7.2.6.2 ANALYSIS OF POLAR VALUE COMPONENTS第151-152页
            7.2.6.3 ANALYSIS OF BISMATH COMPONENT第152页
            7.2.6.4 ANALYSIS OF AMINO ACID COMPOSITION IN CELL WALL第152-153页
    7.3 GROWTH PROMOTING AND STRESS TOLERANCE PROPERTIES OF7197T第153页
    7.4 INOCULATION EFFECT OF7197T ON WHEAT AND MAIZE PLANTS第153-154页
    7.5 SUMMARY OF THE CHAPTER第154-156页
CHAPTER Ⅷ DISCUSSION第156-167页
    8.1 ANALYSIS OF DIVERSITY OF WHEAT ENDOPHYTIC NITROGEN FIXING BACTERIA.第156-158页
    8.2 ANALYSIS OF DIVERSITY OF nif H CONTAINING WHEAT DIAZOTROPHS第158-160页
    8.3 GROWTH PROMOTING AND STRESS TOLERANCE PROPERTIES OF WHEAT ENDOPHYTES第160-163页
    8.4 ANTIDIABETIC AND ANTIMICROBIAL POTENTIALS OF WHEAT ENDOPHYTES第163-165页
    8.5 Characterization of the Isolated Novel Endophytic Bacterium 7197~T (Paenibacillus rhizophilus)第165-167页
CONCLUSION第167-170页
REFERENCES第170-193页
APPENDIX第193-206页
ACKNOWLEDGEMENTS第206-207页
RESUME第207-209页

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