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Single Nucleotide Polymorphisms and the Association Analysis with Growth and Reproductive Traits and the Expression Profiles of the GH,IGF-Ⅰ and IGF-Ⅱ Genes in Jinghai Yellow Chickens

DEDICATION第3-4页
ABSTRACT第4-7页
摘要第8-22页
LIST OF ABBREVIATIONS & SYMBOLS第22-23页
CHAPTER1: LITERATURE REVIEW第23-36页
    1.1 INTRODUCTION第23-24页
    1.2 THE CHICKEN GROWTH HORMONE GENE (GH)第24-25页
        1.2.1 The GH, Somatotropic and Thyrotropic Axes第25页
    1.3 THE INSULIN-LIKE GROWTH FACTOR-Ⅰ GENE (IGF-Ⅰ)第25-27页
        1.3.1 The Insulin-like growth Factor-Ⅰ gene (IGF-Ⅰ) axis第26-27页
    1.4 THE INSULIN-LIKE GROWTH FACTOR-Ⅱ GENE (IGF-Ⅱ)第27-28页
        1.4.1 The Insulin-like growth Factor-Ⅱ gene (IGF-Ⅱ) axis第28页
    1.5 THE GROWTH HORMONE (GH) AND BONE第28-31页
        1.5.1 Effects of GH and IGF-Ⅰ on Longitudinal Bone Growth第29页
        1.5.2 The physiological role of GH and IGF-Ⅰ for bone growth第29-31页
    REFERENCE第31-36页
CHAPTER 2: ASSOCIATION ANALYSIS WITH GROWTH AND REPRODUCTIVE TRAITS AND THE EXPRESSION PROFILES OF THE GH GENE IN JINGHAI YELLOW CHICKENS第36-62页
    2.1 INTRODUCTION第37-38页
    2.2 MATERIAL AND METHODs第38-41页
        2.2.1 Population and samples collection第38-39页
        2.2.2 DNA extraction and genotyping第39页
        2.2.3 Primer design and PCR amplification第39-40页
        2.2.4 Single-strand conformation polymorphism (SSCP) and sequencing第40页
        2.2.5 Expression profiles analysis第40页
        2.2.6 Statistical analysis第40-41页
    2.3 RESULTS第41-56页
        2.3.1 Polymorphisms of GH and genetic variation analysis第41-45页
        2.3.2 Allele and genotype frequency of SNP in GH gene第45-46页
        2.3.3 Association analysis with growth traits in CH gene第46-47页
        2.3.4 Association analysis with reproductive traits in CH gene第47-49页
        2.3.5 Association analysis of interaction effect for growth traits in CH gene第49页
        2.3.6 Association analysis of interaction effect for reproductive traits第49-50页
        2.3.7 Expression profile of GH gene in male and female Jinghai yellow chickens第50-52页
        2.3.8 Expression regularity of GH gene in male and female Jinghai yellow chickens第52-56页
    2.4 DISCUSSION第56-59页
    REFERENCE第59-62页
CHAPTER 3: ASSOCIATION ANALYSIS WITH GROWTH AND REPRODUCTIVE TRAITS AND THE EXPRESSION PROFILES OF THE IGF-Ⅰ GENE IN JINGHAI YELLOW CHICKENS第62-82页
    3.1 INTRODUCTION第62-64页
    3.2 MATERIAL AND METHODS第64-67页
        3.2.1 Population and samples collection第64页
        3.2.2 DNA extraction and genotyping第64页
        3.2.3 Primer design and PCR amplification第64-65页
        3.2.4 Single-strand conformation polymorphism (SSCP) and sequencing第65页
        3.2.5 Expression profiles analysis第65-66页
        3.2.6 Statistical analysis第66-67页
    3.3 RESULTs第67-76页
        3.3.1 Polymorphisms of IGF-Ⅰ and genetic variation analysis第67-69页
        3.3.2 Allele and genotype frequencies of SNP in IGF-Ⅰ gene第69-70页
        3.3.3 Association analysis with growth traits第70页
        3.3.4 Association analysis with reproductive traits第70-71页
        3.3.5 Expression profile of IGF-Ⅰ gene in male and female Jinghai yellow chickens第71-73页
        3.3.6 Expression regularity of IGF-Ⅰ gene in male and female Jinghai yellow chickens第73-76页
    3.4 DISCUSSION第76-79页
    REFERENCE第79-82页
CHAPTER 4: ASSOCIATION ANALYSIS WITH GROWTH AND REPRODUCTIVE TRAITS AND THE EXPRESSION PROFILES OF THE IGF-Ⅱ GENE IN JINGHAI YELLOW CHICKENS第82-106页
    4.1 INTRODUCTION第83-84页
    4.2 MATERIAL AND METHODS第84-87页
        4.2.1 Population and samples collection第84页
        4.2.2 DNA extraction and genotyping第84页
        4.2.3 Primer design and PCR amplification第84-85页
        4.2.4 Single-strand conformation polymorphism (SSCP) and sequencing第85-86页
        4.2.5 Expression profiles analysis第86页
        4.2.6 Statistical analysis第86-87页
    4.3 RESULTS第87-101页
        4.3.1 Polymorphisms of IGF-Ⅱ and genetic variation analysis第87-90页
        4.3.2 Allele and genotype frequency of SNP in IGF-Ⅱ gene第90-91页
        4.3.3 Association analysis with growth traits第91-92页
        4.3.4 Association analysis with reproductive traits第92-93页
        4.3.5 Association analysis of interaction effect for growth traits第93-94页
        4.3.6 Association analysis of interaction effect for Reproductive traits第94-95页
        4.3.7 Expression profiles of IGF-Ⅱ gene in male and female Jinghai yellow chickens第95-97页
        4.3.8 Expression regularity of IGF-Ⅱ gene in male and female Jinghai yellow chickens第97-101页
    4.4 DISCUSSION第101-104页
    REFERENCE第104-106页
CHAPTER 5: ASSOCIATION ANALYSIS OF INTERACTION EFFECT FOR GROWTH AND REPRODUCTIVE TRAITS AMONG THE DETECTED MUTATIONS IN THE GH, IGF-Ⅰ AND IGF-Ⅱ GENES IN JINGHAI YELLOW CHICKENS第106-136页
    5.1 INTRODUCTION第107-108页
    5.2 MATERIAL AND METHODS第108-109页
        5.2.1 Statistical analysis第108-109页
    5.3 RESULTS第109-129页
        5.3.1 Association analysis of interaction effect for growth traits between detected mutations in the GH and IGF-Ⅰ genes第109-110页
        5.3.2 Association analysis of interaction effect for growth traits between detected mutations in the GH and IGF-Ⅱ genes第110-113页
        5.3.3 Association analysis of interaction effect for growth traits between detected mutations in the IGF-Ⅰ and IGF-Ⅱ genes第113-115页
        5.3.4 Association analysis of interaction effect for reproductive traits between detected mutations in the GH and IGF-Ⅰ genes第115-117页
        5.3.5 Association analysis of interaction effect for reproductive traits between detected mutations in the GH and IGF-Ⅱ genes第117-120页
        5.3.6 Association analysis of interaction effect for reproductive traits between detected mutations in the IGF-Ⅰ and IGF-Ⅱ genes第120-121页
        5.3.7 The comparison of expression profile between the GH and IGF-Ⅰ genes in male and female Jinghai yellow chickens第121-123页
        5.3.8 The comparison of expression profile between the GH and IGF-Ⅱ genes in maleand female Jinghai yellow chickens第123-124页
        5.3.9 The comparison of expression profile between the IGF-Ⅰand IGF-Ⅱ genes in maleand female Jinghai yellow chickens第124-126页
        5.3.10 The comparison of expression profile between the GH and IGF-Ⅰ genes in Breastand Leg muscle for both male and female Jinghai yellow chickens第126-127页
        5.3.11 The comparison of expression profile between the GH and IGF-Ⅱ genes in Breastand Leg muscle for both male and female Jinghai yellow chickens第127-128页
        5.3.12 The comparison of expression profile between the IGF-Ⅰ and IGF-Ⅱ genes inBreast and Leg muscle for both male and female Jinghai yellow chickens第128-129页
    5.4 DISGUSSION第129-133页
    REFERENCE第133-136页
CONCLUSION第136-138页
LIST OF PUBLICATIONS第138-139页

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