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烟草响应铬胁迫microRNA与蛋白质的鉴定

Acknowledgement第11-15页
List of Tables第15-16页
List of Figures第16-17页
Abbreviations第17-18页
摘要第18-19页
ABSTRACT第19-20页
CHAPTER 1 LITERATURE REVIEW第21-36页
    1.1 Chromium in the environment第22-23页
        1.1.1 Chromium in water第22页
        1.1.2 Chromium in soil第22-23页
    1.2 Chromium in plants第23-26页
        1.2.1 Chroium uptake第23-24页
        1.2.2 Chromium accumulation and translocation第24-25页
        1.2.3 Plants with phytoremediation potential of Cr contamination第25-26页
    1.3 Effects of Cr on growth and development in plants第26-29页
        1.3.1 Germination第26-27页
        1.3.2 Root growth第27-28页
        1.3.3 Stem growth第28页
        1.3.4 Leaf growth第28-29页
        1.3.5 Ultrastructural changes第29页
    1.4 Effects of Cr on physiological processes in plants第29-34页
        1.4.1 Photosynthesis第29-31页
        1.4.2 Mineral nutrition第31页
        1.4.3 Enzymes and other compounds第31-32页
        1.4.4 Genotoxicity第32页
        1.4.5 Cr-induced changes in proteomics第32-33页
        1.4.6 Cr-induced alterations in miRNAs expression第33-34页
    1.5 Research objectives第34-36页
CHAPTER 2 CHROMIUM-INDUCED CHANGES IN GROWTH,ULTRASTRUCTURE,MINERALCONCENTRATION AND PHOTOSYNTHETIC PERFORMANCE IN TOBACCO第36-46页
    2.1 Materials and methods第37-39页
        2.1.1 Plant culture and Cr treatment第37页
        2.1.2 Growth measurement and metal analysis第37-38页
        2.1.3 Measurement of chlorophyll content,photosynthetic parameters and chlorophyllfluorescence第38页
        2.1.4 Examination of ultrastructure第38-39页
        2.1.5 Statistical analysis第39页
    2.2 Results第39-43页
        2.2.1 Growth traits and metal concentration第39-41页
        2.2.2 Chlorophyll content and photosynthetic parameters第41-42页
        2.2.3 Ultrastructure of chloroplasts第42-43页
    2.3 Discussion第43-45页
    2.4 Conclusion第45-46页
CHAPTER 3 GENOME-WIDE IDENTIFICATION OF Cr STRESS-RESPONSIVE microRNAsAND THEIR TARGET GENES IN TOBACCO ROOTS第46-80页
    3.1 Materials and methods第48-51页
        3.1.1 Plant culture and Cr treatment第48页
        3.1.2 Total RNA extraction,library preparation and sequencing of small RNAs第48-49页
        3.1.3 Bioinformatic analysis of small RNA第49页
        3.1.4 Novel miRNA prediction第49-50页
        3.1.5 Differential expression of Cr-responsive miRNA第50页
        3.1.6 Target prediction of miRNAs and their functional categorization第50页
        3.1.7 qRT-PCR validation第50-51页
        3.1.8 Statistical analysis第51页
    3.2 Results第51-75页
        3.2.1 High-throughput sequencing of tobacco small RNAs第51-54页
        3.2.2 I denticcation and evolutionary conservation of conserved miRNA families第54-66页
        3.2.3 Identification of non-conserved miRNA families第66-67页
        3.2.4 Chromium responsive miRNAs第67-73页
        3.2.5 qRT-PCR validation第73-74页
        3.2.6 Target prediction第74-75页
    3.3 Discussion第75-79页
        3.3.1 Evolutionary conservation of miRNAs in tobacco第75-76页
        3.3.2 Chromium responsive known miRNAs and their targets第76-79页
        3.3.3 Chromium responsive novel miRNAs and their targets第79页
    3.4 Conclusion第79-80页
CHAPTER 4 DIFFERENCE OF Cr-INDUCED CHANGESINLEAFPROTEINPROFILEINTHE TWOCONTRASTING TOBACCO GENOTYPES第80-92页
    4.1 Materials and methods第81-84页
        4.1.1 Plant material,growth conditions and Cr treatment第81页
        4.1.2 Protein extraction and 2-dimensional gel electrophoresis第81-82页
        4.1.3 Protein visualization,image analysis and quantification第82-83页
        4.1.4 Peptide and protein identification by database search第83页
        4.1.5 qRT-PCR analysis第83页
        4.1.6 Statistical analysis第83-84页
    4.2 Results第84-89页
        4.2.1 Differential Cr-induced protein expression in leaves of the two genotypes第84-88页
        4.2.2 Guiyan 1 shows higher expression of genes corresponding to Cr up-regulated proteins第88-89页
    4.3 Discussion第89-91页
    4.4 Conclusic第91-92页
CHAPTER 5 MAJOR FINDINGS AND FUTURE PROSPECTS第92-93页
REFERENCES第93-102页

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