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The Effect of Flavonoids on Fiber Development

List of Abbreviation第7-8页
Abstract第8-9页
Chapter 01 Introduction第10-22页
    1.1. Cotton Introduction第10-11页
        1.1.1. Economic importance of cotton fiber第10-11页
    1.2. Functional analysis of genes第11-12页
        1.2.1. Functional study through gene silencing第11-12页
        1.2.2. Functional study through over expressing gene第12页
    1.3. Genetic engineering of commercially important plants第12-14页
        1.3.1. Agrobacterium mediated transformation第12-14页
        1.3.2. Transformation in Cotton第14页
    1.4. Mechanism of fiber development in cotton第14-19页
        1.4.1. Introduction of flavonoid第15页
        1.4.2. Flavonoids in plants第15-16页
        1.4.3. Flavonoid meabolic pathway in cotton第16-19页
    1.5 Historical Background第19-22页
        1.5.1. Major Findings in Cotton第20-22页
Chapter 02 Material and methods第22-37页
    2.1. Study of F3'H gene in cotton第22-24页
        2.1.1 RNAi vector construction第22-23页
        2.1.2 Over expression vector construction第23-24页
    2.2. Genetic transformation and growth of cotton第24-27页
    2.3. DNA,RNA extraction,PCR and Southern blot analysis第27-29页
    2.4. Ovule culture assay第29-32页
        2.4.1. Chemical and hormones preparation第29-30页
        2.4.2. Stock solutions and BT medium preparation第30页
        2.4.3. Ovary Sterilization and culture第30-31页
        2.4.4. Fiber Yield Analysis(FL and TFU measurement)第31-32页
    2.5. Expression analysis of F3'H candidate genes第32-34页
        2.5.1. Quantitative Real time(qRT)PCR第33-34页
    2.6. Bioinformatics analysis of F3'H putative candidate genes第34-36页
        2.6.1. Sequence retrieval and analysis of F3'H from Arabidopsis thaliana第34-35页
        2.6.2. Sequences retrieval putative F3'H candidates from Gossypium lineage第35页
        2.6.3. Sequences retrieval putative F3'H candidales from other plant species第35页
        2.6.4. Protein domain,motif, annotation,and GO analysis第35-36页
        2.6.5. Phylogenetic tree and structure analysis第36页
    2.7. Statistical analysis第36-37页
Chapter 03 Results第37-51页
    3.1. In-silico sequence identification and analysis of F3'H proteins第37-38页
    3.2. Phylogenetic analysis of F3'H gene family第38-40页
    3.3. Collateral insights into F3'H evolution in Gossypium lineage第40-41页
    3.4. Sequence analysis of putative F3'H genes in cotton第41-43页
    3.5. Expression analysis eight cotton F3'H genes第43-45页
    3.6. Exogenous ERI in ovule cullture assay promoted fiber length第45-47页
    3.7. Expression profiling of cotton F3'H genes from D-genome第47-49页
    3.8. Results from Cotton Transgenic Plants第49-51页
        3.8.1. Confirmation of F3'H silence plants and Southern blot analysis第49-51页
Chapter 04 Discussion第51-54页
    4.1. Future Considerations第52-54页
References第54-65页
Acknowledgements第65-67页
Suplementry Data第67-78页
    Supplementary table S1第68-72页
    Supplementary table S2第72-78页

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