首页--农业科学论文--农作物论文--经济作物论文--棉论文

陆地棉SSR遗传多样性及纤维品质和产量性状关联作图

摘要第5-6页
Abstract第6-7页
Abbreviations第14-15页
CHAPTER 1 INTRODUCTION第15-33页
    1.1 Production and economic importance of cotton第15-16页
    1.2 Cotton germplasm resources and diversity第16-18页
        1.2.1 The cotton gene pool第16页
        1.2.2 Origin and distribution of Upland cotton第16-17页
        1.2.3 Genetic diversity extent in Upland cotton第17-18页
    1.3 Molecular markers used in cotton genetic study第18-22页
        1.3.1 Restriction fragment length polymorphisms (RFLPs)第19页
        1.3.2 Randomly amplified polymorphic DNA (RAPD)第19-20页
        1.3.3 Amplified fragment length polymorphisms (AFLPs)第20页
        1.3.4 Simple sequence repeats (SSRs)第20-21页
        1.3.5 Single-nucleotide polymorphisms (SNPs)第21-22页
    1.4 Quantitative traits第22-23页
    1.5 Linkage mapping第23-24页
    1.6 Association mapping第24-31页
        1.6.1 Why association mapping?第24页
        1.6.2 Candidate gene and genome wide association mapping第24-26页
        1.6.3 Linkage disequilibrium and association mapping第26页
        1.6.4 Quantifying linkage disequilibrium第26-28页
        1.6.5 Factors affecting linkage disequilibrium第28-29页
        1.6.6 Implication of linkage disequilibrium in association mapping第29-30页
        1.6.7 Linkage disequilibrium and association mapping in cotton第30-31页
    1.7 Study hypothesis and objectives第31-33页
CHAPTER 2 MATERIALS AND METHODS第33-46页
    2.1 Plant genetic materials第33页
    2.2 Field experiment第33-37页
        2.2.1 Experimental locations第33-34页
        2.2.2 Experimental design and procedures第34页
        2.2.3 Data collection on phenotypic traits第34-37页
    2.3 Laboratory experiment第37-40页
        2.3.1 SSR markers selection第37页
        2.3.2 Genomic DNA extraction第37-38页
        2.3.3 PCR amplification第38-39页
        2.3.4 Gel electrophoresis第39-40页
    2.4 Molecular data collection and analysis第40-43页
        2.4.1 Genetic diversity and phylogeny第40-43页
    2.5 Association analysis第43-46页
        2.5.1 Phenotypic data analysis第43页
        2.5.2 Population structure and differentiation第43-44页
        2.5.3 Relative kinship第44页
        2.5.4 Linkage disequilibrium第44-45页
        2.5.5 Marker-trait association第45-46页
CHAPTER 3 RESULTS第46-86页
    3.1 Genetic diversity and phylogenic analysis第46-58页
        3.1.1 SSR polymorphism in the whole germplasm第46-52页
        3.1.2 Genetic distance and phylogenic analysis in the whole germplasm第52-54页
        3.1.3 Genetic distance and phylogenic analysis in the model-based Bayesianpopulations第54-56页
        3.1.4 SSR polymorphisms within inferred and predefined populations第56-58页
    3.2 SSR marker-trait association analyses第58-86页
        3.2.1 Performance evaluation, correlations and heritability estimates ofphenotypic traits第58-69页
        3.2.2 Population structure and differentiation第69-74页
        3.2.3 Pair-wise relative kinship第74-76页
        3.2.4 Linkage disequilibrium第76-78页
        3.2.5 SSR loci associated with fiber yield and quality traits第78-86页
CHAPTER 4 DISCUSSIONS第86-101页
    4.1 Genetic diversity第86-91页
    4.2 Population structure and kinship第91-94页
    4.3 Variations of quantitative traits第94-97页
    4.4 Linkage disequilibrium第97-98页
    4.5 QTL identified through genome-wide association mapping第98-101页
CONCLUSIONS第101-102页
REFERENCES第102-117页
Appendix A第117-125页
Appendix B第125-126页
Appendix C第126-134页
Appendix D第134-138页
Appendix E第138-141页
ACKNOWLEDGEMENTS第141-142页
CURRICULUM VITA第142页

论文共142页,点击 下载论文
上一篇:云存储服务选择关键技术研究
下一篇:具有高效单质汞氧化性能SCR催化剂的制备及其性能研究