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Genetic Diversity and Population Structure of Chinese Misgurnus Anguillicaudatus and Elopichthys Bambusa in the Yangtze River Basin as Revealed by Molecular Markers

Abstract第8-10页
摘要第11-13页
Abbreviations第13-15页
Chapter 1第15-62页
    1.1 Review of literature第15-34页
        1.1.1 General overview第15-16页
        1.1.2 Biology of M. anguillicaudatus第16-19页
        1.1.3 Genetics and fisheries management第19页
        1.1.4 Population genetics第19-21页
        1.1.5 Testing the basic assumptions for population genetic analysis第21-29页
        1.1.6 Environmental perturbation and population genetics of fish第29-31页
        1.1.7 Hydrological alterations and loach populations in central China第31-32页
        1.1.8 Microsatellites as tool for population genetic study第32-34页
    1.2 Objectives of the study第34页
    1.3 Materials and methods第34-46页
        1.3.1 Fish sampling第34-35页
        1.3.2 The pairwise geographical distance between the sampling localities第35页
        1.3.3 Flow cytometric screening for ploidy level第35-37页
        1.3.4 DNA extraction of the fish samples第37-38页
        1.3.5 DNA analysis through agarose gel electrophoresis第38-39页
        1.3.6 Spectrophotometric analysis of DNA第39-40页
        1.3.7 Screening of primers for polymorphism第40-42页
        1.3.8 Amplification of microsatellite loci第42-43页
        1.3.9 Polyacrylamide gel electrophoresis第43-44页
        1.3.10 Silver staining第44-45页
        1.3.11 Software and analytical packages第45页
        1.3.12 Data analyses第45-46页
    1.4 Results第46-57页
        1.4.1 Genetic diversity第46-52页
        1.4.2 Population genetic structure第52-57页
    1.5 Discussion第57-62页
        1.5.1 Genetic diversity in Chinese M. anguillicaudatus第57-58页
        1.5.2 Population structure第58-60页
        1.5.3 Habitat fragmentation and implications for M. anguillicaudatus第60-62页
Chapter 2第62-94页
    2.1 Review of literature第62-71页
        2.1.1 General overview第62-63页
        2.1.2 Biology of E. bambusa第63-65页
        2.1.3 Spawning of E. bambusa第65页
        2.1.4 Interest to fisheries and research第65页
        2.1.5 Artificial domestication第65-66页
        2.1.6 Genetics and fisheries management第66页
        2.1.7 Population genetics第66页
        2.1.8 Testing the basic assumptions for population genetic analysis第66页
        2.1.9 Environmental perturbation and populations genetics of fish第66页
        2.1.10 Microsatellites as tool for population genetics study第66-67页
        2.1.11 Molecular divergence and phylogeography of Asiatic cyprinids第67-69页
        2.1.12 Mitochondrial DNA as marker for genetic and evolutionary studies第69-71页
    2.2 Objectives of the study第71页
    2.3 Materials and methods第71-77页
        2.3.1 Fish sampling第71-72页
        2.3.2 The pairwise geographical distance between the sampling localities第72-73页
        2.3.3 DNA extraction of the fish samples第73页
        2.3.4 DNA analysis through Agarose gel electrophoresis第73页
        2.3.5 Spectrophotometric analysis of DNA第73页
        2.3.6 Amplification, electrophoresis and analyses of microsatellite loci第73-75页
        2.3.7 Amplification, sequencing and analyses of Cyt b sequences第75-77页
    2.4 Results第77-89页
        2.4.1 Results as inferred from microsatellite loci第77-83页
        2.4.2 Results as inferred from Cyt b sequences analyses第83-89页
    2.5 Discussion第89-94页
        2.5.1 Microsatellite diversity in E. bambusa第89-90页
        2.5.2 Mitochondrial diversity第90页
        2.5.3 Population structure第90-91页
        2.5.4 The hydrological alterations and E. bambusa spawning第91-92页
        2.5.5 Divergent mtDNA lineages of E. bambusa第92-93页
        2.5.6 Conservation of vulnerable populations第93-94页
Conclusion and future implications第94-96页
Literature cited第96-115页
Curriculum vitae第115-118页
Acknowledgements第118页

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