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Functional Characterization of Three VQ Motif-containing Genes in Rice-Xoo Interaction

ABSTRACT第11-12页
ABBREVIATIONS第13-14页
CHAPTER ONE: INTRODUCTION第14-50页
    1 Overview第14-50页
        1.1 Rice (Oryza sativa L) as a crop第14-18页
            1.1.1 Origin, dispersal, variation and cultivation第14-16页
            1.1.2 Rice bacterial blight disease第16-18页
        1.2 Plants defense mechanism第18-20页
        1.3 Plants pathogen recognition mechanism第20-23页
            1.3.1 PAMP recognition and the PRR第20-21页
            1.3.2 Recognition of effector by R protein第21-23页
        1.4 Plant disease-related genes第23-24页
            1.4.1 Plant disease-resistant gene is a good genetic resource第23-24页
        1.5 Mitogen-Activated Protein Kinase (MAPK) signaling in defense response第24-29页
        1.6 Transcription factor-mediated disease responses第29-32页
            1.6.1 OsWRKY transcription factors第29-32页
        1.7 VQ Motif-containing gene as interacting partner第32-38页
            1.7.1 Structural features of VQ proteins第32-33页
            1.7.2 VQ-domain proteins in Arabidopsis第33-35页
            1.7.3 VQ-domain proteins in rice第35-38页
        1.8 Plant transformation第38-42页
            1.8.1 Agrobacterium-mediated transformation method第39-40页
            1.8.2 Vectors and markers in gene transfer第40-41页
            1.8.3 Transgenic analysis第41-42页
        1.9 Artificial microRNA based gene silencing第42-46页
        1.10 Yeast two-hybrid assay in protein-protein interaction第46-48页
        1.11 Aim and objective of the study第48-50页
CHAPTER TWO: MATERIALS AND METHODS第50-61页
    2.1 Selecting the VQ genes第50页
    2.2 Rice material第50页
    2.3 Primers and uses第50-51页
    2.4 Strains and vectors第51页
    2.5 OsVQ11 and OsVQ13 overexpression vector construction第51-52页
    2.6 Vector construction for artificial microRNA (amiRNA)第52-54页
    2.7 Vector construction for Yeast Two Hybrid (Y2H) assay第54-55页
    2.8 Agrobacterium-mediated genetic transformation in rice第55-56页
    2.9 Pathogen culture,pathogen inoculation and disease scoring第56页
    2.10 DNA extraction第56页
    2.11 Gene expression analysis第56-58页
        2.11.1 RNA extraction and reverse transcription第56-57页
        2.11.2 Reverse transcription PCR (RT-PCR)第57页
        2.11.3 Quantitative real time polymerase chain reaction (qRT-PCR)第57-58页
    2.12 Statistical analysis第58页
    2.13 Yeast Two Hybrid assay第58-61页
CHAPTER THREE: RESULTS第61-83页
    3.1 Performance and expression of OsVQ11 and OsVQ13 overexpression plants第61-68页
    3.2 Performance and expression of OsVQ11,OsVQ13 and OsVQ40 knock-down plants第68-80页
        3.2.1 VQ11-ami knock-down plants in response to PXO347第68-72页
        3.2.2 VQ13-ami knock-down plants showed susceptibility in response to PXO347第72-76页
        3.2.3 Performance and expression level of VQ40-ami in response to PXO347第76-80页
    3.3 Protein protein interaction in yeast cell第80-83页
        3.3.1 Interaction of OsVQs with OsMPKs第80-81页
        3.3.2 Interaction of OsVQs with OsWRKYs第81-83页
CHAPTER FOUR: DISCUSSION第83-87页
    4.1 The possibility of rice VQ gene participates in rice-pathogen interaction第83-85页
    4.2 VQ proteins may acts as interacting partner with MAPK第85-87页
CHAPTER FIVE: REFERENCES第87-111页
APPENDIX第111-125页
    1 Protocol第111-122页
    2 Supplemental data第122-125页
ACKNOWLEDGEMENT第125-126页

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