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绵羊胚胎发育后期骨骼肌中转录组水平基因表达分析及基因网络的构建

摘要第4-5页
Abstract第5页
List of abbreviations第9-11页
Chapter 1 Introduction第11-14页
    1.1 Waves of myogenesis in animal第11-12页
    1.2 Factors affecting animal muscle development第12-13页
    1.3 Application of microarray technology in skeletal muscle development research第13页
    1.4 Summary第13-14页
Chapter 2 Morphology and gene expression in LD muscle of ovine fetus第14-32页
    2.1 Introduction第14页
    2.2 Objective for current research第14-15页
    2.3 Materials and Methods第15-19页
        2.3.1 Ethics statement第15页
        2.3.2 Animals第15页
        2.3.3 Samples collection and RNA extraction第15-16页
        2.3.4 Histology analysis第16页
        2.3.5 Analysis for Gene expression data第16-18页
            2.3.5.1 Microarray transcript profiling第16-17页
            2.3.5.2 Statistical analysis of microarray data第17页
            2.3.5.3 Biological interpretation of the differentially expressed genes第17-18页
            2.3.5.4 Visual exploration of the biological interaction network第18页
            2.3.5.5 Identification of conserved cis-regulatory motifs第18页
        2.3.6 Quantitative real-time reverse transcription PCR第18-19页
    2.4 Results第19-28页
        2.4.1 Changes in the myofiber traits in LD muscle第19-20页
        2.4.2 Global gene expression in LD throughout investigation第20-21页
        2.4.3 Clusters of the differentially expressed genes第21-24页
        2.4.4 Identification of significantly over-represented GO terms,keywords,and pathways in each cluster第24-25页
        2.4.5 Module visualization and differential interaction networks analysis第25-27页
        2.4.6 Identification of conserved cis-regulatory motifs in gene groups第27-28页
    2.5 Discussion第28-32页
        2.5.1 Changes in muscle fiber number and size during the last half of ovine gestation第28-29页
        2.5.2 Oxidative metabolism in muscles during the last third of ovine gestation第29-30页
        2.5.3 Lipid metabolism in muscles during the last third of ovine gestation第30-31页
        2.5.4 Mechanisms controlling the changes in gene expression during the second half of ovine gestation第31-32页
    2.6 Conclusions第32页
References第32-41页
ACKNOWLEDGMENTS第41-42页
Supporting Information第42-75页
PUBLICATION第75-76页

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